gatk3的最后一个经典版本3.8

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David Roazen 19ceca5e86 Queue: add -qsub-broad argument When -qsub-broad is specified instead of -qsub, use the "h_vmem" parameter instead of "h_rss" to specify memory limit requests. Also cause the GridEngine native arguments to be output by default to the logger, instead of only when in debug mode.		2015-04-27 17:43:25 -04:00
licensing	Updated license information	2014-10-14 17:10:12 -04:00
protected	Fix implementation of allowNonUniqueKmersInRef so that it applies to all kmer sizes	2015-04-23 13:01:47 -04:00
public	Queue: add -qsub-broad argument	2015-04-27 17:43:25 -04:00
settings/helpTemplates	Output JSON version of docs for Galaxy	2014-10-09 06:42:25 -04:00
.gitignore	Fixed bug using GraphBased due to infinite likelihoods resulting from the calculation of alignment cost of very long insertion or deletions (done in linear scale)	2014-04-01 16:14:52 -04:00
README.md	Update README file for the 2.6 release	2013-06-20 13:08:29 -04:00
ant-bridge.sh	Added faster built executable, non-packaged jars.	2014-11-05 00:30:46 +08:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
pom.xml	Faster builds, with updates to documentation generation.	2014-11-05 00:32:23 +08:00

The Genome Analysis Toolkit