Mark DePristo 191e4ca251 Merge pull request #300 from broadinstitute/mc_move_qualify_intervals_to_protected ... Few bug fixes to this tool now that it is in protected		2013-06-24 09:35:45 -07:00
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src/org/broadinstitute/sting	Merge pull request #300 from broadinstitute/mc_move_qualify_intervals_to_protected	2013-06-24 09:35:45 -07:00
test/org/broadinstitute/sting	Another fix for the Indel Realigner that arises because of secondary alignments.	2013-06-21 16:59:22 -04:00