ebanks 1901e3208e Oops, ran integration tests before Guillermo committed his change to the Beagle code ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4281 348d0f76-0448-11de-a6fe-93d51630548a		2010-09-15 01:41:02 +00:00
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config	Provide a default logger, some config settings, and some doc updates.	2009-04-29 02:06:05 +00:00
src	We now do lazy loading for the genotype data in VCF. Practically, almost all walkers end of loading the genotype data because we need to be smarter about transfering the unparsed genotype string when modifying VariantContexts; however, this does solve the problem for VR's piece to generate clusters (shaved off 75% of runtime for Ryan's large case). That further optimization will happen later.	2010-09-15 00:18:17 +00:00
test	Oops, ran integration tests before Guillermo committed his change to the Beagle code	2010-09-15 01:41:02 +00:00