gatk-3.8/java/lib/edu/mit/broad/picard/cmdline/Option.java

61 lines
2.4 KiB
Java

/*
* The Broad Institute
* SOFTWARE COPYRIGHT NOTICE AGREEMENT
* This software and its documentation are copyright 2008 by the
* Broad Institute/Massachusetts Institute of Technology. All rights are reserved.
*
* This software is supplied without any warranty or guaranteed support whatsoever. Neither
* the Broad Institute nor MIT can be responsible for its use, misuse, or functionality.
*/
package edu.mit.broad.picard.cmdline;
import java.lang.annotation.Documented;
import java.lang.annotation.ElementType;
import java.lang.annotation.Retention;
import java.lang.annotation.RetentionPolicy;
import java.lang.annotation.Target;
/**
* Used to annotate which fields of a CommandLineProgram are options given at the command line.
* If a command line call looks like "cmd option=foo x=y bar baz" the CommandLineProgram
* would have annotations on fields to handle the values of option and x. All options
* must be in the form name=value on the command line. The java type of the option
* will be inferred from the type of the field or from the generic type of the collection
* if this option is allowed more than once. The type must be an enum or
* have a constructor with a single String parameter.
*
* @author Alec Wysoker
*/
@Retention(RetentionPolicy.RUNTIME)
@Target(ElementType.FIELD)
@Documented
public @interface Option {
/** The name of the option as it would appear on the command line. */
String shortName() default "";
/** Text that appears for this option in text describing usage of the command line program. */
String doc() default "";
/**
* If set to false, an exception will be thrown if the option is not specified.
* If 2 options are mutually exclusive and both have optional=false it will be
* interpreted as one or the other is required and an exception will only be thrown if
* neither are specified.
*/
boolean optional() default false;
/**
* Array of option names that cannot be used in conjunction with this one.
* If 2 options are mutually exclusive and both have optional=false it will be
* interpreted as one OR the other is required and an exception will only be thrown if
* neither are specified.
*/
String[] mutex() default {};
/** The minimum number of times that this option is required. */
int minElements() default 0;
/** The maximum number of times this option is allowed. */
int maxElements() default Integer.MAX_VALUE;
}