gatk-3.8/java/src/org/broadinstitute/sting
chartl 173956927b Summaries generated for firehose from DoC output have been migrated to its own walker to calculate aggregate coverage statistics in a parallelizable and fast way. This is an initial commit, bug-fixing and testing is upcoming.
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2876 348d0f76-0448-11de-a6fe-93d51630548a
2010-02-23 18:41:02 +00:00
..
alignment Misc bug fixes. 2010-01-05 14:48:19 +00:00
analyzecovariates Added an option to AnalyzeCovariates to set the max value of the histograms to make them easier to directly compare. 2010-01-31 23:13:57 +00:00
gatk Eliminate a few stray loci that weren't being filtered out. 2010-02-23 18:00:52 +00:00
oneoffprojects Summaries generated for firehose from DoC output have been migrated to its own walker to calculate aggregate coverage statistics in a parallelizable and fast way. This is an initial commit, bug-fixing and testing is upcoming. 2010-02-23 18:41:02 +00:00
playground Added a playground concordance analyzer for summarizing VariantEval across a group. 2010-02-22 20:28:52 +00:00
utils adding code to deal with the off-spec situation where our minimum likelihood is above the GLF max of 255. 2010-02-22 22:27:39 +00:00