Mauricio Carneiro 16caca0822 BLASR BAMs and new BWA parameters ... *Added the functions to turn a BLASR generated BAM file into a usable BAM file. *Modified the bwa parameters according to test results from NA12878 pb2k dataset.		2011-08-24 17:04:07 -04:00
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qscript/org/broadinstitute/sting/queue/qscripts	BLASR BAMs and new BWA parameters	2011-08-24 17:04:07 -04:00
src/org/broadinstitute/sting/queue	BLASR BAMs and new BWA parameters	2011-08-24 17:04:07 -04:00
test/org/broadinstitute/sting/queue	Updates to JobRunners from the Queue developer community and from running the WholeGenomePipeline:	2011-08-22 15:13:27 -04:00