Eric Banks 2e36dd9001 Refactoring of CombineGVCFs to make it run a lot faster. ... Creating new VariantContexts each time we broke up a block was very expensive because we break up blocks so often. Also, calling into GATKVariantContextUtils.simpleMerge was really hurting performance. MD5 changes because we no longer propogate any INFO fields (except for END) for reference blocks; the tests have the now unused BLOCK_SIZE field that now get dropped.		2014-02-11 03:18:52 -05:00
..
src	Refactoring of CombineGVCFs to make it run a lot faster.	2014-02-11 03:18:52 -05:00
pom.xml	Added a set of serial tests to gatk/queue packages, which runs all tests under their package in one TestNG execution.	2014-02-06 08:25:38 -05:00