delangel 78f5309656 Intermediate commit of indel consensus VQSR script, a couple of new features added, not for general use ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5951 348d0f76-0448-11de-a6fe-93d51630548a		2011-06-06 13:27:02 +00:00
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Phase1IndelCalling.scala	Removed unused importants, but some of these scripts are now out of date (they have been for a long time) so they don't compile anyway	2011-05-22 18:43:48 +00:00
Phase1IndelProjectConsensus.scala	Script to run UG to create annotated all-pop VCF files to use for Phase1 VQSR indel project consensus. Paralleles and generalizes SNP version, so in theory this script can be used for both SNP and Indel consensus.	2011-05-25 16:50:59 +00:00
Phase1IndelVQSR.scala	Intermediate commit of indel consensus VQSR script, a couple of new features added, not for general use	2011-06-06 13:27:02 +00:00