gatk3的最后一个经典版本3.8

Matt Hanna 15533e08df Fixed issue with RODWalker parallelization. ... Turns out that someone previously upped the declared size of a ROD shard to 100M bases, making each ROD shard larger than the size of chr20. Why didn't we see this in Stable? Because the ShardStrategy/ShardStrategyFactory mechanism was dutifully ignoring the shard size specification. When I rolled the ShardStrategy/ShardStrategyFactory mechanics back into the DataSources as part of the async I/O project, I inadvertently reenabled this specifier.		2011-12-07 11:55:42 -05:00
public	Fixed issue with RODWalker parallelization.	2011-12-07 11:55:42 -05:00
settings	Revved Picard to incorporate tfennell's AsyncSAMFileWriter.	2011-12-06 10:37:42 -05:00
.gitignore	Minor additions to the shared .gitignore file, now that Mark has checked one in.	2011-10-26 12:24:28 -04:00
LICENSE	One last test...	2011-06-28 19:18:17 -04:00
build.xml	Extensive unit test for GenotypeContextUnitTest	2011-11-20 18:28:01 -05:00
ivy.xml	Updating the HybridSelectionPipeline for SnpEff 2.0.4 RC3	2011-11-17 14:46:12 -05:00