gatk3的最后一个经典版本3.8

Eric Banks 14bbba0980 Optimization to method for getting values in ArgumentMatch ... * Very trivial, but I happened to see this code and it drove me nuts so I felt compelled to refactor it. * Instead of iterating over keys in map to get the values, just iterate over the values...		2013-04-04 23:30:47 -04:00
licensing	Removing the symlink from the private license file	2013-02-09 12:57:44 -05:00
protected	Critical bug fix for the case of duplicate map calls in ActiveRegionWalkers with exome interval lists.	2013-04-03 13:15:30 -04:00
public	Optimization to method for getting values in ArgumentMatch	2013-04-04 23:30:47 -04:00
settings	Fixed issues raised by Appistry QA (mostly small fixes, corrections & clarifications to GATKDocs)	2013-03-12 10:57:14 -04:00
.gitignore	Fixing the licensing scripts	2013-01-26 13:42:49 -05:00
build.xml	Disable Contracts for Java for tests	2013-04-04 11:56:17 -04:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	Brought all of ReduceReads to fastutils	2013-02-23 22:53:23 -05:00