asivache 14198b74d5 Can now compute av. qualities and stddevs per cycle for both original (when present in bam) and recalibrated quals ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4111 348d0f76-0448-11de-a6fe-93d51630548a		2010-08-25 17:14:58 +00:00
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config	Provide a default logger, some config settings, and some doc updates.	2009-04-29 02:06:05 +00:00
src	Can now compute av. qualities and stddevs per cycle for both original (when present in bam) and recalibrated quals	2010-08-25 17:14:58 +00:00
test	Command-line argument tagging is in, and the ROD system is hacked slightly to support the new syntax	2010-08-25 03:47:57 +00:00