gatk-3.8/java/test/org/broadinstitute/sting/gatk/walkers/variantutils
kiran 13f29660bb Integration test for SelectVariants. Tests a complex case with an explicit sample selection, sample selection by regex, exclusion of non-variant and filtered loci, and JEXL selection on low allele-frequency variants
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3976 348d0f76-0448-11de-a6fe-93d51630548a
2010-08-08 05:49:47 +00:00
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CombineVariantsIntegrationTest.java -minimalVCF for CombineVariants. Work around for broken locking code. 2010-08-06 16:10:59 +00:00
CombineVariantsUnitTest.java VariantContext has now moved over to Tribble, and the VCF4 parser is now the only VCF parser in town. Other changes include: 2010-08-05 18:47:53 +00:00
LiftoverVariantsIntegrationTest.java Removed hard-coded pointers to references 2010-08-04 17:59:37 +00:00
SelectVariantsIntegrationTest.java Integration test for SelectVariants. Tests a complex case with an explicit sample selection, sample selection by regex, exclusion of non-variant and filtered loci, and JEXL selection on low allele-frequency variants 2010-08-08 05:49:47 +00:00