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BoundedReadIterator.java
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Switch TraverseByLoci over to new sharding system, and cleanup some code in passing read files along
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2009-05-15 21:02:12 +00:00 |
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BoundedReferenceIterator.java
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Update to latest version of picard. Change imports in all classes dependent on picard public from import edu.mit.broad.picard... to import net.sf.picard...
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2009-05-28 20:13:01 +00:00 |
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DownsampleIterator.java
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Switch TraverseByLoci over to new sharding system, and cleanup some code in passing read files along
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2009-05-15 21:02:12 +00:00 |
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GenomeLocusIterator.java
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Cleanup in datasources.providers namespace. Make it easier for others writing traversal engines to use.
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2009-05-22 19:12:00 +00:00 |
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LocusContextIterator.java
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LocusIterator iterated through LocusContexts, which was fine until now when we need something
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2009-05-12 13:54:57 +00:00 |
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LocusContextIteratorByHanger.java
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LocusIterator iterated through LocusContexts, which was fine until now when we need something
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2009-05-12 13:54:57 +00:00 |
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LocusIterator.java
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Break locus context data access providers into modular components in preparation for traverse by loci.
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2009-05-13 18:51:16 +00:00 |
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MergingSamRecordIterator2.java
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equals signs can be important
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2009-06-01 16:56:21 +00:00 |
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NullSAMIterator.java
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@Required / @Allows flags for main arguments.
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2009-05-19 23:26:17 +00:00 |
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PushbackIterator.java
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Enabled iterator() function
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2009-04-30 22:15:14 +00:00 |
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ReferenceIterator.java
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Update to latest version of picard. Change imports in all classes dependent on picard public from import edu.mit.broad.picard... to import net.sf.picard...
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2009-05-28 20:13:01 +00:00 |
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SamQueryIterator.java
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Fixing problems with SAMQueryIterator and reads
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2009-04-02 18:04:28 +00:00 |
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SortSamIterator.java
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Switch TraverseByLoci over to new sharding system, and cleanup some code in passing read files along
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2009-05-15 21:02:12 +00:00 |
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StingSAMIterator.java
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Switch TraverseByLoci over to new sharding system, and cleanup some code in passing read files along
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2009-05-15 21:02:12 +00:00 |
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StingSAMIteratorAdapter.java
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Switch TraverseByLoci over to new sharding system, and cleanup some code in passing read files along
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2009-05-15 21:02:12 +00:00 |
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ThreadedIterator.java
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Make the operation 'read from the iterator and place on the queue' atomic with respect to hasNext(), next().
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2009-04-23 20:16:26 +00:00 |
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VerifyingSamIterator.java
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Switch TraverseByLoci over to new sharding system, and cleanup some code in passing read files along
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2009-05-15 21:02:12 +00:00 |
fc91e3e30e