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BlockDrivenSAMDataSource.java
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For Kristian: functions which, given a read, can uniquely identify the BAM file storing that read.
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2010-03-31 20:46:44 +00:00 |
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IndexDrivenSAMDataSource.java
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For Kristian: functions which, given a read, can uniquely identify the BAM file storing that read.
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2010-03-31 20:46:44 +00:00 |
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ReadStreamPointer.java
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Fix off-by-one error in original implementation of read sharding. Tested by
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2010-03-06 18:52:53 +00:00 |
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ReadStreamResource.java
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For Kristian: functions which, given a read, can uniquely identify the BAM file storing that read.
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2010-03-31 20:46:44 +00:00 |
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ReferenceOrderedDataSource.java
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Removing the code that made the ROD system case insensitive. Anyone using specific ROD names in their classes should take care in naming required tracks; All lowercase is the best practice.
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2010-04-16 06:17:31 +00:00 |
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ResourcePool.java
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Reduce by interval alterations to interface with new sharding system. This checkin with be followed by a
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2010-02-25 00:16:50 +00:00 |
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SAMDataSource.java
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For Kristian: functions which, given a read, can uniquely identify the BAM file storing that read.
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2010-03-31 20:46:44 +00:00 |
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SAMReaderID.java
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First pass at handling SAMFileReaders using a SAMReaderID. This allows us to firewall
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2010-03-04 00:59:32 +00:00 |
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SAMResourcePool.java
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For Kristian: functions which, given a read, can uniquely identify the BAM file storing that read.
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2010-03-31 20:46:44 +00:00 |
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SimpleDataSource.java
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Changed dataSources to datasources, to be consistant with the rest of our package names. Also, this makes me champion in the largest check-in contest.
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2009-06-11 18:13:22 +00:00 |
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SimpleDataSourceLoadException.java
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Changed dataSources to datasources, to be consistant with the rest of our package names. Also, this makes me champion in the largest check-in contest.
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2009-06-11 18:13:22 +00:00 |
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SimpleDataSourceSplitException.java
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Changed dataSources to datasources, to be consistant with the rest of our package names. Also, this makes me champion in the largest check-in contest.
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2009-06-11 18:13:22 +00:00 |
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package-info.java
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Turn javadoc comments for packages and classes into key/value pairs in a properties file. Embed the properties file
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2009-12-04 20:08:41 +00:00 |
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