gatk3的最后一个经典版本3.8

Mark DePristo 12f4c6307e AutoFormattingTime cleanup and complete unittests ... -- Underlying system now uses long nano times to be more consistent with standard java practice -- Updated a few places in the code that were converting from nanoseconds to double seconds to use the new nanoseconds interface directly -- Bringing us to 100% test coverage with clover with AutoFormattingTimeUnitTest		2013-01-02 11:29:25 -05:00
licensing	Final final final version of the license.	2012-07-20 18:00:02 -04:00
protected/java	Protect against non-standard ref bases. Ryan, please review.	2012-12-26 15:46:21 -05:00
public	AutoFormattingTime cleanup and complete unittests	2013-01-02 11:29:25 -05:00
settings	Final r119 tribble jar	2012-11-02 14:30:33 -04:00
.gitignore	adding some directories to gitignore	2012-09-27 11:09:41 -04:00
build.xml	Re-enabling contracts in tests in build.xml	2013-01-02 11:29:25 -05:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	Use build jars in test classpaths by default	2012-11-28 22:57:04 -05:00