Mark DePristo 1200848bbf Part II of GSA-462: Consistent RODBinding access across Ref and Read trackers ... -- Deleted ReadMetaDataTracker -- Added function to ReadShard to give us the span from the left most position of the reads in the shard to the right most, which is needed for the new view		2012-08-30 10:15:10 -04:00
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net/sf	Fixing bug in fasta .fai generation: trim the contig names to the first whitespace if one appears. We now generate indexes identical to samtools.	2012-08-29 22:36:27 -04:00
org/broadinstitute/sting	Part II of GSA-462: Consistent RODBinding access across Ref and Read trackers	2012-08-30 10:15:10 -04:00