Mark DePristo 11dbfc92a7 Horrible bugfix to decodeLoc() in BCF2Codec ... -- Just completely wrong. -- BCF2 shadowBCF now checks that the shadow bcf can be written to avoid /dev/null.bcf problem -- Added samtools ex2.bcf file for decoding to our integrationtests		2012-06-26 15:28:32 -04:00
..
R	Bugfix for R 2.15 not including reshape	2012-06-14 16:42:29 -04:00
c	At chartl's request, add the bwa aln -N and bwa aln -m parameters to the bindings.	2012-01-17 14:47:53 -05:00
chainFiles	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
doc	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
java	Horrible bugfix to decodeLoc() in BCF2Codec	2012-06-26 15:28:32 -04:00
keys	Public-key authorization scheme to restrict use of NO_ET	2012-03-06 00:09:43 -05:00
packages	Temporary fake release directories for Bamboo testing purposes	2012-05-31 16:04:07 -04:00
perl	Update to the bindings for liftOverVCF.pl (to -V from -B)	2011-09-15 15:33:09 -04:00
scala	Merged bug fix from Stable into Unstable	2012-06-26 14:55:41 -04:00
testdata	Moved most testdata from public to private	2012-06-21 15:17:19 -04:00