gatk3的最后一个经典版本3.8

Mark DePristo 11dbfc92a7 Horrible bugfix to decodeLoc() in BCF2Codec ... -- Just completely wrong. -- BCF2 shadowBCF now checks that the shadow bcf can be written to avoid /dev/null.bcf problem -- Added samtools ex2.bcf file for decoding to our integrationtests		2012-06-26 15:28:32 -04:00
licensing	Remove old licensing	2012-04-25 12:23:08 -04:00
protected/java	Moving ReduceReads into protected	2012-06-25 17:01:33 -04:00
public	Horrible bugfix to decodeLoc() in BCF2Codec	2012-06-26 15:28:32 -04:00
settings	Rev tribble to 110. Log is:	2012-06-26 15:28:32 -04:00
.gitignore	Minor additions to the shared .gitignore file, now that Mark has checked one in.	2011-10-26 12:24:28 -04:00
build.xml	ant fasttest: for when you just can't wait	2012-06-01 15:17:18 -04:00
ivy.xml	JEXL update	2012-06-21 15:17:21 -04:00