jmaguire 11723fbcc2 added method indelPileup. Generates a pileup of indel alleles given reads and ofsets (as from a locus walker). ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@663 348d0f76-0448-11de-a6fe-93d51630548a		2009-05-12 15:08:24 +00:00
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config	Provide a default logger, some config settings, and some doc updates.	2009-04-29 02:06:05 +00:00
src/org/broadinstitute/sting	added method indelPileup. Generates a pileup of indel alleles given reads and ofsets (as from a locus walker).	2009-05-12 15:08:24 +00:00
test/org/broadinstitute/sting	intervals_file + genome_loc => intervals.	2009-05-12 01:04:18 +00:00