Mark DePristo 101ffc4dfd Expanded, contrastive VariantContextBenchmark ... -- Compares performance across a bunch of common operations with GATK 1.3 version of VariantContext and GATK 1.4 -- 1.3 VC and associated utilities copied wholesale into test directory under v13		2011-11-16 13:35:16 -05:00
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v13	Expanded, contrastive VariantContextBenchmark	2011-11-16 13:35:16 -05:00
AlleleUnitTest.java	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
GenotypeLikelihoodsUnitTest.java	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
GenotypeUnitTest.java	Framework for genotype unit test	2011-09-24 08:56:45 -04:00
VCFJarClassLoadingUnitTest.java	Modified the VCFJarClassLoadingUnitTest to play nice with the packaged-jar test targets.	2011-10-25 14:47:15 -04:00
VariantContextBenchmark.java	Expanded, contrastive VariantContextBenchmark	2011-11-16 13:35:16 -05:00
VariantContextIntegrationTest.java	More tools moved over. Fixed the VariantContextIntegrationTest which was not useful because the md5s were all removed. In the future, instead of removing md5s (putting it in 'parameterization' mode), you should instead use @Test{enabled=false} since it's easier to track.	2011-08-10 14:24:40 -04:00
VariantContextUnitTest.java	ID field now stored in the VariantContext itself, not the attributes	2011-11-15 14:56:33 -05:00
VariantContextUtilsUnitTest.java	ID field now stored in the VariantContext itself, not the attributes	2011-11-15 14:56:33 -05:00
VariantJEXLContextUnitTest.java	ID field now stored in the VariantContext itself, not the attributes	2011-11-15 14:56:33 -05:00