Mark DePristo 1011f3862b CalibrateGenotypeLikelihoods now emits the position of the variant for debugging ... -- Refactored some duplicated code (FYI, code duplication = root of all evil) into shared functions -- Added long-missing integrationtests -- CHRIS/RYAN -- it would be very good to add an integration test covering external VCF files as I believe we rely on this functionality and it's not tested at all		2012-03-09 16:00:07 -05:00
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config	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
src	BAMScheduler: detect contigs from the interval list that are not in the merged BAM header's sequence dictionary	2012-03-09 15:20:16 -05:00
test	CalibrateGenotypeLikelihoods now emits the position of the variant for debugging	2012-03-09 16:00:07 -05:00