gatk3的最后一个经典版本3.8

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Eric Banks 0fac4fb3b6 Make the reference model calculation work with reduced reads. It's just a matter of using PileupElement.getRepresentativeCount() instead of '++'.		2013-11-21 10:53:33 -05:00
licensing	deleted old license files	2013-07-02 16:36:47 -04:00
protected	Make the reference model calculation work with reduced reads.	2013-11-21 10:53:33 -05:00
public	Rewrite ReadLengthDistribution to count the read lengths into a hash table first and only at the end to produce a GATK report table.	2013-11-18 17:29:31 -05:00
settings	Tweaked gatkdocs index template	2013-11-19 15:05:41 -05:00
.gitignore	Detect stuck lock-acquisition calls, and disable file locking for tests	2013-04-24 22:49:02 -04:00
README.md	Update README file for the 2.6 release	2013-06-20 13:08:29 -04:00
build.xml	Resolving warnings	2013-09-23 12:42:22 -04:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	Changing from scala 2.9.2 to 2.10.2.	2013-09-23 12:42:22 -04:00

The Genome Analysis Toolkit