carneiro 50c870cfce Data Processing Pipeline: local indel realignment, mark duplicates and BQSR. Done. ... Pacbio pipeline: now all pacbio bams have baq annotated in so running UG is uber fast. Methods pipeline: minor cosmetic changes. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5253 348d0f76-0448-11de-a6fe-93d51630548a		2011-02-16 17:22:30 +00:00
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MethodsDevelopmentCallingPipeline.scala	Data Processing Pipeline: local indel realignment, mark duplicates and BQSR. Done.	2011-02-16 17:22:30 +00:00