Mark DePristo 0db79207e8 Refactored dependancy from CommandLineGATK from javadocs ... This allows us to run the GATK again in environments without Javadoc loading by default in the classpath		2011-08-08 12:27:13 -04:00
..
R	GATKReport v0.2:	2011-08-03 00:24:47 -04:00
c	Reinitialize random seed in the bwa bindings from the fixed seed stored in the	2011-07-22 13:41:53 -04:00
chainFiles	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
doc	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
java	Refactored dependancy from CommandLineGATK from javadocs	2011-08-08 12:27:13 -04:00
packages	Added edu.mit.broad.picard to Queue packaged jar.	2011-07-23 14:40:29 -04:00
perl	Moving these supported perl scripts to public	2011-07-01 17:26:25 -04:00
scala	Merged bug fix from Stable into Unstable	2011-08-08 10:50:09 -04:00
testdata	Testdata for diffObjects.	2011-07-18 10:47:03 -04:00