kiran 0da0dfa1da Cosmetic change - lower-case for all command-line arguments' short names. ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3971 348d0f76-0448-11de-a6fe-93d51630548a		2010-08-08 04:12:01 +00:00
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config	Provide a default logger, some config settings, and some doc updates.	2009-04-29 02:06:05 +00:00
src	Cosmetic change - lower-case for all command-line arguments' short names.	2010-08-08 04:12:01 +00:00
test	Added a generic method for returning the complete command-line used when calling a walker, to be used in the bam/vcf headers. As requested, every possible engine/walker argument is included. I've added it to the Unified Genotyper output, so people can try it out and let me know what they think. Something that needs to be discussed in group meeting: what happens when we merge VCFs? Do we keep all of the command-lines?	2010-08-08 03:53:07 +00:00