gatk3的最后一个经典版本3.8

David Roazen 0d93330ab9 Fix bug in the PerSampleDownsamplingReadsIterator that could lead to excessive memory usage at traversal startup ... This is a MUST-HAVE update for GATK 2.3 users who want to try out the new ability to use -dcov with ReadWalkers.		2012-12-19 02:05:36 -05:00
licensing	Final final final version of the license.	2012-07-20 18:00:02 -04:00
protected/java	Fixing an off-by-one clipping error in ReduceReads for reads off the contig	2012-12-13 22:10:11 -05:00
public	Fix bug in the PerSampleDownsamplingReadsIterator that could lead to excessive memory usage at traversal startup	2012-12-19 02:05:36 -05:00
settings	Final r119 tribble jar	2012-11-02 14:30:33 -04:00
.gitignore	adding some directories to gitignore	2012-09-27 11:09:41 -04:00
build.xml	Refactored entire NA12878KB to allow us to easily build a na12878kb.jar for IGV integration	2012-11-29 14:38:09 -05:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	Use build jars in test classpaths by default	2012-11-28 22:57:04 -05:00