ebanks 0d58e4ccc9 -check original alignments for indels when computing mismatch score ... -move logging to debug git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@778 348d0f76-0448-11de-a6fe-93d51630548a		2009-05-21 19:55:42 +00:00
..
config	Provide a default logger, some config settings, and some doc updates.	2009-04-29 02:06:05 +00:00
src/org/broadinstitute/sting	-check original alignments for indels when computing mismatch score	2009-05-21 19:55:42 +00:00
test/org/broadinstitute/sting	Test class for PathUtils.	2009-05-21 19:31:22 +00:00