Eric Banks 0d282a7750 Bam writing from HaplotypeCaller seems to be working on all my test cases. Note that it's a hidden debugging option for now. ... Please let me know if you notice any bad behavior with it.		2013-01-16 00:12:02 -05:00
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config	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
src	Bam writing from HaplotypeCaller seems to be working on all my test cases. Note that it's a hidden debugging option for now.	2013-01-16 00:12:02 -05:00
test	Add a test to LocusIteratorByState to ensure that we aren't holding reads anywhere	2013-01-14 16:30:16 -05:00