gatk3的最后一个经典版本3.8

Eric Banks 0d282a7750 Bam writing from HaplotypeCaller seems to be working on all my test cases. Note that it's a hidden debugging option for now. ... Please let me know if you notice any bad behavior with it.		2013-01-16 00:12:02 -05:00
licensing	Cleaning CRLF terminations in the licenses	2013-01-10 17:06:29 -05:00
protected/java	Bam writing from HaplotypeCaller seems to be working on all my test cases. Note that it's a hidden debugging option for now.	2013-01-16 00:12:02 -05:00
public	Bam writing from HaplotypeCaller seems to be working on all my test cases. Note that it's a hidden debugging option for now.	2013-01-16 00:12:02 -05:00
settings	Final r119 tribble jar	2012-11-02 14:30:33 -04:00
.gitignore	adding some directories to gitignore	2012-09-27 11:09:41 -04:00
build.xml	Updating Queue maven version to 0.0.2	2013-01-10 13:46:49 -05:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	ReadBackedPileup cleanup	2013-01-11 15:17:18 -05:00