gatk3的最后一个经典版本3.8

Mauricio Carneiro 0cd9438ac2 fixed soft unclipped calculation ... * getRefCoordSoftUnclippedEnd was not resetting the shift when hitting insertions. Fixed. * getReadCoordinateForReferenceCoordinateBeforeAlignmentEnd was returning the wrong read coordinate position. Fixed.		2011-08-30 02:45:29 -04:00
public	fixed soft unclipped calculation	2011-08-30 02:45:29 -04:00
settings	Build.xml -- contracts not built by default. Slightly simpler CSS for dl.	2011-08-19 15:07:26 -04:00
LICENSE	One last test...	2011-06-28 19:18:17 -04:00
build.xml	Build.xml -- contracts not built by default. Slightly simpler CSS for dl.	2011-08-19 15:07:26 -04:00
ivy.xml	The tribble dependency is now handled through ivy. Revved tribble to r18 and removed obsolete build targets in build.xml	2011-08-11 16:38:29 -04:00