David Roazen e740977994 GATK Engine: do not merge FilePointers that span multiple contigs ... This affects both the non-experimental and experimental engine paths, and so may break tests, but this is a necessary change.		2012-09-27 18:02:25 -04:00
..
alignment	Part II of GSA-462: Consistent RODBinding access across Ref and Read trackers	2012-08-30 10:15:10 -04:00
commandline	Cleanup RefMetaDataTracker before refactoring ReadMetaDataTracker	2012-08-30 10:13:06 -04:00
gatk	GATK Engine: do not merge FilePointers that span multiple contigs	2012-09-27 18:02:25 -04:00
jna	Device files like /dev/null are now tracked as special by Queue and are not used to generate .out file paths, scattered into a temporary directory, gathered, deleted, etc.	2012-01-23 16:17:04 -05:00
queue	Removed 'Walker' suffix from packages/GATKEngine.xml that were breaking the packaged release.	2012-07-23 16:32:31 -04:00
utils	Fixes GSA-515 Nanoscheduler GSA-577 -nt and -nct together appear to not close resources properly	2012-09-24 14:15:35 -04:00