gatk3的最后一个经典版本3.8

Eric Banks 0c46845c92 Refactored the BaseCounts classes so that they are safer and allow for calculations on the most probable base (which is not necessarily the most common base).		2012-10-04 10:37:11 -04:00
licensing	Revert unintentional license change	2012-08-09 17:10:47 -04:00
protected/java	Refactored the BaseCounts classes so that they are safer and allow for calculations on the most probable base (which is not necessarily the most common base).	2012-10-04 10:37:11 -04:00
public	GATK Engine: do not merge FilePointers that span multiple contigs	2012-09-27 18:02:25 -04:00
settings	Updating cofoja to the latest version	2012-08-09 16:36:18 -04:00
.gitignore	a few more useful git ignores	2012-09-01 11:08:36 -04:00
build.xml	Proper error handling in NanoScheduler	2012-09-19 17:03:13 -04:00
ivy.xml	Updating cofoja to the latest version	2012-08-09 16:36:18 -04:00