gatk3的最后一个经典版本3.8

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sathibault 0a8f75b953 Merge branch 'master' into st_fpga_hmm Conflicts: protected/java/src/org/broadinstitute/sting/gatk/walkers/haplotypecaller/HaplotypeCaller.java		2013-07-15 08:17:32 -05:00
licensing	deleted old license files	2013-07-02 16:36:47 -04:00
protected	Merge branch 'master' into st_fpga_hmm	2013-07-15 08:17:32 -05:00
public	Merge branch 'master' into st_fpga_hmm	2013-07-15 08:17:32 -05:00
settings	Rev picard, sam-jdk, tribble, and variant to version 1.91.1453	2013-05-07 14:21:15 -04:00
.gitignore	Detect stuck lock-acquisition calls, and disable file locking for tests	2013-04-24 22:49:02 -04:00
README.md	Update README file for the 2.6 release	2013-06-20 13:08:29 -04:00
build.xml	Fail gracefully in the packaging system when bcel is not installed	2013-07-02 15:50:51 -04:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	Brought all of ReduceReads to fastutils	2013-02-23 22:53:23 -05:00

The Genome Analysis Toolkit