gatk-3.8/public/java
Mark DePristo 097ed4ecc4 Memory usage optimizations and safety improvements to StratNode and StratificationManager
-- Added memory and safety optimizations to StratNode and StratificationManager.  Fresh, immutable Hashmaps are allocated for final data structures, so they exactly the correct size and cannot be changed by users.
-- Added ability of a stratification to specify incompatible evaluation.  The two strats using this are AC and Sample with VariantSummary, as this computes per-sample averages and so combining these results in an O(n^2) memory requirement.  Added integration test to cover incompatible strats and evals
2012-03-30 15:31:55 -04:00
..
config Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
src Memory usage optimizations and safety improvements to StratNode and StratificationManager 2012-03-30 15:31:55 -04:00
test Memory usage optimizations and safety improvements to StratNode and StratificationManager 2012-03-30 15:31:55 -04:00