gatk3的最后一个经典版本3.8

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Steve Huang 091d05370b Fix 1448 to make alt allele removal by likelihoods robust to ref allele indices (#1475 ) * alt alle removal by likelihoods now robust to ref allele indices (no longer assumes 0-indexed ref)		2016-09-13 21:20:44 -04:00
.github	Add "GATK4 Implications" section to GATK3 pull request template	2016-05-06 13:39:47 -04:00
licensing	Update licenses	2016-03-05 01:09:43 -08:00
protected	Fix 1448 to make alt allele removal by likelihoods robust to ref allele indices (#1475 )	2016-09-13 21:20:44 -04:00
public	Upgrade Apache Commons Collections to version 3.2.2	2016-09-07 18:59:21 -04:00
settings/helpTemplates	GATKDocs overhaul	2016-05-29 16:35:08 -04:00
.gitignore	Added issue and pull request templates	2016-04-04 13:27:45 -04:00
README.md	Update README file for the 2.6 release	2013-06-20 13:08:29 -04:00
ant-bridge.sh	Added faster built executable, non-packaged jars.	2014-11-05 00:30:46 +08:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
pom.xml	Update pom versions to mark the start of GATK 3.7 development	2016-06-01 17:21:48 -04:00

The Genome Analysis Toolkit