gatk3的最后一个经典版本3.8

Ryan Poplin 08e0889f0a Adding multi sample haplotype caller integration test. Changing interval list to include multi-allelic event. Fix to force a consistent ordering of the best alleles so that the multi-allelic alleles and GLs come out in a deterministic order.		2011-12-14 12:15:30 -05:00
public	The log10cache needs to be larger if we want to handle 10K samples in the UG.	2011-12-13 23:36:10 -05:00
settings	Revved Picard to incorporate tfennell's AsyncSAMFileWriter.	2011-12-06 10:37:42 -05:00
.gitignore	Minor additions to the shared .gitignore file, now that Mark has checked one in.	2011-10-26 12:24:28 -04:00
LICENSE	One last test...	2011-06-28 19:18:17 -04:00
build.xml	Extensive unit test for GenotypeContextUnitTest	2011-11-20 18:28:01 -05:00
ivy.xml	Updating the HybridSelectionPipeline for SnpEff 2.0.4 RC3	2011-11-17 14:46:12 -05:00