Mark DePristo 08de4dfd96 Missed one integration test		2012-05-29 07:23:24 -04:00
..
alignment	Reinitialize random seed in the bwa bindings from the fixed seed stored in the	2011-07-22 13:41:53 -04:00
commandline	Added ability to specify arguments in files via -args/--arg_file	2011-10-24 15:58:34 -04:00
gatk	Missed one integration test	2012-05-29 07:23:24 -04:00
jna	When using bam list mode in HSP deriving VCF name from bam list instead of requiring an additional parameter.	2011-12-16 18:09:25 -05:00
utils	Made GQ an int, not a float. Updated VC code and lots of corresponding MD5s	2012-05-28 20:20:05 -04:00
BaseTest.java	Made GQ an int, not a float. Updated VC code and lots of corresponding MD5s	2012-05-28 20:20:05 -04:00
MD5DB.java	Made GQ an int, not a float. Updated VC code and lots of corresponding MD5s	2012-05-28 20:20:05 -04:00
MD5Mismatch.java	Final updates to integration tests for BCF2	2012-05-24 10:58:59 -04:00
StingTextReporter.java	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
WalkerTest.java	Made GQ an int, not a float. Updated VC code and lots of corresponding MD5s	2012-05-28 20:20:05 -04:00