Mark DePristo 0892f2b8b2 Closing GSA-287:LocusReferenceView doesn't do very well in the case where contigs land off the end of the reference ... -- Confirmed that reads spanning off the end of the chromosome don't cause an exception by adding integration test for a single read that starts 7 bases from the end of chromosome 1 and spans 90 bases or so off. Added pileup integration test to ensure this behavior continues to work		2012-09-03 20:18:56 -04:00
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config	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
src	Make BaseRecalibration thread-safe	2012-08-31 13:42:42 -04:00
test	Closing GSA-287:LocusReferenceView doesn't do very well in the case where contigs land off the end of the reference	2012-09-03 20:18:56 -04:00