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gatk-3.8/protected/java/test/org/broadinstitute/sting/utils/recalibration
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Ryan Poplin 07fe3dd1ef Merge branch 'master' of github.com:broadinstitute/gsa-unstable 2013-01-30 13:19:24 -05:00
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ContextCovariateUnitTest.java Updated all JAVA file licenses accordingly 2013-01-10 17:06:41 -05:00
CycleCovariateUnitTest.java Updated all JAVA file licenses accordingly 2013-01-10 17:06:41 -05:00
QualQuantizerUnitTest.java Updated all JAVA file licenses accordingly 2013-01-10 17:06:41 -05:00
ReadCovariatesUnitTest.java Updated all JAVA file licenses accordingly 2013-01-10 17:06:41 -05:00
ReadGroupCovariateUnitTest.java Updated all JAVA file licenses accordingly 2013-01-10 17:06:41 -05:00
RecalDatumUnitTest.java The Empirical quality column in the recalibration report can't be compared in the BQSRGatherer because the value is calculated using the Bayesian estimate with different priors. This value should never be used from a recalibration report anyway except during plotting. 2013-01-30 12:28:14 -05:00
RecalUtilsUnitTest.java Updated all JAVA file licenses accordingly 2013-01-10 17:06:41 -05:00
RecalibrationReportUnitTest.java Updated all JAVA file licenses accordingly 2013-01-10 17:06:41 -05:00
RecalibrationTablesUnitTest.java Updated all JAVA file licenses accordingly 2013-01-10 17:06:41 -05:00
RecalibrationTestUtils.java Updated all JAVA file licenses accordingly 2013-01-10 17:06:41 -05:00
RepeatCovariatesUnitTest.java Move BaseUtils back to the GATK by request, along with associated utility methods 2013-01-30 13:09:44 -05:00