chartl 07d381ec51 BatchMerge now uses the correct UG settings, recently added by Eric ... ExpandIntervals now checks that identical intervals are not created by (un)fortunately-spaced targets VCFExtractIntervals no longer creates duplicate intervals in the case where a VCF has multiple entries at the same site git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5294 348d0f76-0448-11de-a6fe-93d51630548a		2011-02-23 18:46:15 +00:00
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qscript	BatchMerge now uses the correct UG settings, recently added by Eric	2011-02-23 18:46:15 +00:00
src/org/broadinstitute/sting	BatchMerge now uses the correct UG settings, recently added by Eric	2011-02-23 18:46:15 +00:00
test/org/broadinstitute/sting/queue	Defaulting the MFCP to run without a tear script.	2011-02-17 21:13:14 +00:00