Mauricio Carneiro 07c1e113cd Fixed interval traversal for previously hard clipped reads. ... If a read was hard clipped for being low quality and no does not overlap the interval anymore, this read will now be discarded instead of treated as an error by the GATK traversal engine.		2011-08-16 14:18:05 -04:00
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config	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
src	Fixed interval traversal for previously hard clipped reads.	2011-08-16 14:18:05 -04:00
test	Removed a public -> private dependency in our test suite.	2011-08-12 17:29:10 -04:00