hanna 0791beab8f Checking in downsampling iterator alongside LocusIteratorByState, and removing ... the reference implementation. Also implemented a heap size monitor that can be used to programmatically report the current heap size. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3367 348d0f76-0448-11de-a6fe-93d51630548a		2010-05-17 21:00:44 +00:00
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alignment	The copyright tag that I copied/pasted from a LaTeX document into IntelliJ had	2010-04-20 15:26:32 +00:00
analyzecovariates	The copyright tag that I copied/pasted from a LaTeX document into IntelliJ had	2010-04-20 15:26:32 +00:00
commandline	The copyright tag that I copied/pasted from a LaTeX document into IntelliJ had	2010-04-20 15:26:32 +00:00
gatk	Checking in downsampling iterator alongside LocusIteratorByState, and removing	2010-05-17 21:00:44 +00:00
oneoffprojects	Changes to DepthOfCoverage (JIRA items) and added back an integration test to cover it. Alterations to the design file generator to output all transcripts (rather than choosing one at random).	2010-05-17 17:23:00 +00:00
playground	Removed the confusionMatrix column (of *course* this is a confusion matrix... what else would it be?!).	2010-05-14 21:55:37 +00:00
utils	Checking in downsampling iterator alongside LocusIteratorByState, and removing	2010-05-17 21:00:44 +00:00