Mauricio Carneiro 07128a2ad2 ReadUtils cleanup ... * Removed all clipping functionality from ReadUtils (it should all be done using the ReadClipper now) * Cleaned up functionality that wasn't being used or had been superseded by other code (in an effort to reduce multiple unsupported implementations) * Made all meaningful functions public and added better comments/explanation to the headers		2011-12-20 17:48:40 -05:00
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net/sf	Performance improvements for dynamically merging BAMs in read walkers.	2011-12-16 09:37:44 -05:00
org/broadinstitute/sting	ReadUtils cleanup	2011-12-20 17:48:40 -05:00