Mauricio Carneiro 58420098ac Merged bug fix from Stable into Unstable		2012-08-09 13:02:23 -04:00
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bqsr	Smoothing in the BQSR bins should be one error observation and one non-error observation.	2012-07-26 13:59:02 -04:00
compression/reducereads	Fixed divide by zero bug when downsampler goes over regions where reads are all filtered out. Added Guillermo's bug report as an integration test	2012-08-09 13:02:11 -04:00
genotyper	Rename per-sample ML allelic fractions and counts so that they don't have the same name as the per-site INFO fields, and clarify wording in VCF header	2012-08-09 09:58:20 -04:00
haplotypecaller	Updating HaplotypeCaller integration tests	2012-08-06 12:02:19 -04:00