gatk3的最后一个经典版本3.8

Mauricio Carneiro 05111eeaef Making nContigs parameter hidden in ReduceReads ... For now, the het reduction should only be performed for diploids (n=2). We haven't really tested it for other ploidy so it should remain hidden until someone braves it out.		2012-10-12 14:49:15 -04:00
licensing	Revert unintentional license change	2012-08-09 17:10:47 -04:00
protected/java	Making nContigs parameter hidden in ReduceReads	2012-10-12 14:49:15 -04:00
public	Merging in from cmi-develop branch - staying in this branch for now	2012-10-11 15:35:43 -04:00
settings	Updating cofoja to the latest version	2012-08-09 16:36:18 -04:00
.gitignore	adding some directories to gitignore	2012-10-10 13:26:13 -04:00
build.xml	Proper error handling in NanoScheduler	2012-09-19 17:03:13 -04:00
intellij_example.tar.bz2	Adding intellij example configuration files	2012-10-10 13:20:30 -04:00
ivy.xml	Updating cofoja to the latest version	2012-08-09 16:36:18 -04:00