gatk3的最后一个经典版本3.8

Tad Jordan 04e3978b04 Fixed VariantEval tests ... -Added sorting by rows to VariantEval		2013-01-07 12:45:32 -05:00
licensing	Final final final version of the license.	2012-07-20 18:00:02 -04:00
protected/java	Bug fix in the HC's allele mapping for multi-allelic events. Using the allele alone as a key isn't sufficient because alleles change when the reference allele changes during VariantContextUtils.simpleMerge for multi-allelic events.	2013-01-07 11:05:44 -05:00
public	Fixed VariantEval tests	2013-01-07 12:45:32 -05:00
settings	Final r119 tribble jar	2012-11-02 14:30:33 -04:00
.gitignore	adding some directories to gitignore	2012-09-27 11:09:41 -04:00
build.xml	Re-enabling contracts in tests in build.xml	2013-01-02 11:29:25 -05:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	Use build jars in test classpaths by default	2012-11-28 22:57:04 -05:00