Mauricio Carneiro 04d8bcaf19 Fixed bai removal on picard tools ... BAM index files were not being deleted because picard replaces the name of the file with bai instead of appending to it.		2011-08-22 18:03:39 -04:00
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R	GATKReport v0.2:	2011-08-03 00:24:47 -04:00
c	Reinitialize random seed in the bwa bindings from the fixed seed stored in the	2011-07-22 13:41:53 -04:00
chainFiles	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
doc	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
java	Merge branch 'rodTesting'	2011-08-22 17:43:47 -04:00
packages	Added edu.mit.broad.picard to Queue packaged jar.	2011-07-23 14:40:29 -04:00
perl	Moving these supported perl scripts to public	2011-07-01 17:26:25 -04:00
scala	Fixed bai removal on picard tools	2011-08-22 18:03:39 -04:00
testdata	GZIP VCF for testing	2011-08-19 09:05:39 -04:00