gatk3的最后一个经典版本3.8

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pdexheimer 0405afeab2 Inherit BamGatherFunction from MergeSamFiles rather than PicardBamFunction - This change means that BamGatherFunction will now have an @Output field for the BAM index, which will allow the bai to be deleted for intermediate functions Signed-off-by: Khalid Shakir <kshakir@broadinstitute.org>		2014-02-26 02:11:28 +08:00
licensing	deleted old license files	2013-07-02 16:36:47 -04:00
protected	Stopgap procedure to rescue Fisher Strand for cases where there's lots of data.	2014-02-25 01:04:27 -05:00
public	Inherit BamGatherFunction from MergeSamFiles rather than PicardBamFunction	2014-02-26 02:11:28 +08:00
settings/helpTemplates	Replaced local drmaa and Jama artifacts with versions from maven central.	2014-02-22 01:21:35 +08:00
.gitignore	Adding the external example to the build.	2014-02-15 01:26:07 +08:00
README.md	Update README file for the 2.6 release	2013-06-20 13:08:29 -04:00
ant-bridge.sh	Add ability to run *KnowledgeBaseTests to maven	2014-02-11 14:08:24 -05:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
pom.xml	Moved private/scala/test to private/queue-private/src/test/scala	2014-02-22 01:21:35 +08:00

The Genome Analysis Toolkit