gatk3的最后一个经典版本3.8

Eric Banks 03df5e6ee6 - Added more comprehensive tests for consensus creation to RR. Still need to add tests for I/D ops. ... - Added RR qual correctness tests (note that this is a case where we don't add code coverage but still need to test critical infrastructure). - Also added minor cleanup of BaseUtils		2013-02-01 15:37:19 -05:00
licensing	Refrain from pushing symlinks into the repo... not all filesystems treat it correctly	2013-01-22 15:18:19 -07:00
protected/java	- Added more comprehensive tests for consensus creation to RR. Still need to add tests for I/D ops.	2013-02-01 15:37:19 -05:00
public	- Added more comprehensive tests for consensus creation to RR. Still need to add tests for I/D ops.	2013-02-01 15:37:19 -05:00
settings	Rev picard, sam-jdk, and tribble	2013-02-01 13:51:30 -05:00
.gitignore	Fixing the licensing scripts	2013-01-26 13:42:49 -05:00
build.xml	Move AWS keys to a resources subdirectory within the phonehome package	2013-01-31 11:56:34 -05:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	ReadBackedPileup cleanup	2013-01-11 15:17:18 -05:00