gatk-3.8/archive/java/src/org/broadinstitute/sting/oldindels
asivache cf3e59eb4a back to archive
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2478 348d0f76-0448-11de-a6fe-93d51630548a
2009-12-29 22:00:38 +00:00
..
ConsensusSequence.java Move Andrey's old indel code (plus MSG accuracy test, which depends on it) to archive. 2009-12-01 05:29:00 +00:00
CountedObject.java back to archive 2009-12-29 22:00:38 +00:00
CountedObjectComparatorAdapter.java More archiving (with permission from Andrey) plus a move to core. 2009-12-03 15:40:27 +00:00
DiscardingPileReceiver.java Move Andrey's old indel code (plus MSG accuracy test, which depends on it) to archive. 2009-12-01 05:29:00 +00:00
DiscardingReceiver.java Move Andrey's old indel code (plus MSG accuracy test, which depends on it) to archive. 2009-12-01 05:29:00 +00:00
Indel.java Move Andrey's old indel code (plus MSG accuracy test, which depends on it) to archive. 2009-12-01 05:29:00 +00:00
IndelInspectorMain.java Move Andrey's old indel code (plus MSG accuracy test, which depends on it) to archive. 2009-12-01 05:29:00 +00:00
IndelRecordPileCollector.java Move Andrey's old indel code (plus MSG accuracy test, which depends on it) to archive. 2009-12-01 05:29:00 +00:00
IndexedSequence.java Move Andrey's old indel code (plus MSG accuracy test, which depends on it) to archive. 2009-12-01 05:29:00 +00:00
Interval.java More archiving (with permission from Andrey) plus a move to core. 2009-12-03 15:40:27 +00:00
IntervalComparator.java Move Andrey's old indel code (plus MSG accuracy test, which depends on it) to archive. 2009-12-01 05:29:00 +00:00
KmerCodeIterator.java Move Andrey's old indel code (plus MSG accuracy test, which depends on it) to archive. 2009-12-01 05:29:00 +00:00
MSAColumn.java Move Andrey's old indel code (plus MSG accuracy test, which depends on it) to archive. 2009-12-01 05:29:00 +00:00
Matrix.java Move Andrey's old indel code (plus MSG accuracy test, which depends on it) to archive. 2009-12-01 05:29:00 +00:00
MultipleAlignment.java Move Andrey's old indel code (plus MSG accuracy test, which depends on it) to archive. 2009-12-01 05:29:00 +00:00
PairwiseAlignment.java Move Andrey's old indel code (plus MSG accuracy test, which depends on it) to archive. 2009-12-01 05:29:00 +00:00
PassThroughWriter.java Move Andrey's old indel code (plus MSG accuracy test, which depends on it) to archive. 2009-12-01 05:29:00 +00:00
PileBuilder.java Move Andrey's old indel code (plus MSG accuracy test, which depends on it) to archive. 2009-12-01 05:29:00 +00:00
RecordPileReceiver.java Move Andrey's old indel code (plus MSG accuracy test, which depends on it) to archive. 2009-12-01 05:29:00 +00:00
RecordReceiver.java Move Andrey's old indel code (plus MSG accuracy test, which depends on it) to archive. 2009-12-01 05:29:00 +00:00
SequencePile.java Move Andrey's old indel code (plus MSG accuracy test, which depends on it) to archive. 2009-12-01 05:29:00 +00:00
ShowMSA.java Move Andrey's old indel code (plus MSG accuracy test, which depends on it) to archive. 2009-12-01 05:29:00 +00:00
SimpleInterval.java More archiving (with permission from Andrey) plus a move to core. 2009-12-03 15:40:27 +00:00
StrictlyUpperTriangularMatrix.java Move Andrey's old indel code (plus MSG accuracy test, which depends on it) to archive. 2009-12-01 05:29:00 +00:00
SymmetricMatrix.java Move Andrey's old indel code (plus MSG accuracy test, which depends on it) to archive. 2009-12-01 05:29:00 +00:00